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VariantAnnotation.php 2.2KB

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  1. <?php
  2. /*
  3. * Copyright 2014 Google Inc.
  4. *
  5. * Licensed under the Apache License, Version 2.0 (the "License"); you may not
  6. * use this file except in compliance with the License. You may obtain a copy of
  7. * the License at
  8. *
  9. * http://www.apache.org/licenses/LICENSE-2.0
  10. *
  11. * Unless required by applicable law or agreed to in writing, software
  12. * distributed under the License is distributed on an "AS IS" BASIS, WITHOUT
  13. * WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the
  14. * License for the specific language governing permissions and limitations under
  15. * the License.
  16. */
  17. class Google_Service_Genomics_VariantAnnotation extends Google_Collection
  18. {
  19. protected $collection_key = 'transcriptIds';
  20. public $alternateBases;
  21. public $clinicalSignificance;
  22. protected $conditionsType = 'Google_Service_Genomics_ClinicalCondition';
  23. protected $conditionsDataType = 'array';
  24. public $effect;
  25. public $geneId;
  26. public $transcriptIds;
  27. public $type;
  28. public function setAlternateBases($alternateBases)
  29. {
  30. $this->alternateBases = $alternateBases;
  31. }
  32. public function getAlternateBases()
  33. {
  34. return $this->alternateBases;
  35. }
  36. public function setClinicalSignificance($clinicalSignificance)
  37. {
  38. $this->clinicalSignificance = $clinicalSignificance;
  39. }
  40. public function getClinicalSignificance()
  41. {
  42. return $this->clinicalSignificance;
  43. }
  44. /**
  45. * @param Google_Service_Genomics_ClinicalCondition
  46. */
  47. public function setConditions($conditions)
  48. {
  49. $this->conditions = $conditions;
  50. }
  51. /**
  52. * @return Google_Service_Genomics_ClinicalCondition
  53. */
  54. public function getConditions()
  55. {
  56. return $this->conditions;
  57. }
  58. public function setEffect($effect)
  59. {
  60. $this->effect = $effect;
  61. }
  62. public function getEffect()
  63. {
  64. return $this->effect;
  65. }
  66. public function setGeneId($geneId)
  67. {
  68. $this->geneId = $geneId;
  69. }
  70. public function getGeneId()
  71. {
  72. return $this->geneId;
  73. }
  74. public function setTranscriptIds($transcriptIds)
  75. {
  76. $this->transcriptIds = $transcriptIds;
  77. }
  78. public function getTranscriptIds()
  79. {
  80. return $this->transcriptIds;
  81. }
  82. public function setType($type)
  83. {
  84. $this->type = $type;
  85. }
  86. public function getType()
  87. {
  88. return $this->type;
  89. }
  90. }